Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha2Q91Y17 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha2Q91Y17 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha2Q91Y17 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha2Q91Y17 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha2Q91Y17 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha2Q91Y17 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha2Q91Y17 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha2Q91Y17 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdha2Q91Y17 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Gm15371-201ENSMUST00000117057 784 ntBASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Gm11918-201ENSMUST00000121660 179 ntBASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Gm5186-201ENSMUST00000218781 920 ntBASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdha2Q91Y17 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha2Q91Y17 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Gm7653-201ENSMUST00000214567 508 ntBASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha2Q91Y17 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms