Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm21470-201ENSMUST00000187680 696 ntBASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Krtap13-201ENSMUST00000053149 882 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb20Q91XZ9 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Gm15321-201ENSMUST00000121290 288 ntBASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Gm4540-201ENSMUST00000170669 429 ntBASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Gm4804-201ENSMUST00000182234 999 ntBASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Gm18799-201ENSMUST00000189104 913 ntBASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Gm42783-201ENSMUST00000197075 795 ntBASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Gm44830-201ENSMUST00000207667 584 ntBASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 AC132237.2-201ENSMUST00000221702 1209 ntBASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Phf7-206ENSMUST00000228437 1373 ntBASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb20Q91XZ9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pcdhb20Q91XZ9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.52□□□□□ -0.24
Pcdhb20Q91XZ9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb20Q91XZ9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Pcdhb20Q91XZ9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb20Q91XZ9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb20Q91XZ9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb20Q91XZ9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pcdhb20Q91XZ9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Gm12134-201ENSMUST00000122109 520 ntBASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 V1rg10-201ENSMUST00000183378 937 ntBASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Gm37858-201ENSMUST00000192759 1231 ntBASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Gm5425-201ENSMUST00000214125 459 ntBASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Gm18026-201ENSMUST00000222789 727 ntBASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 AC154484.1-201ENSMUST00000227311 771 ntBASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Gm37891-201ENSMUST00000195585 1326 ntBASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Arl14ep-202ENSMUST00000093883 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Syt7-205ENSMUST00000224135 1557 ntBASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb20Q91XZ9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb20Q91XZ9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms