Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx41Q91VN6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Gm43433-201ENSMUST00000196573 481 ntBASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.67■□□□□ 0.1
Ddx41Q91VN6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Gm15240-201ENSMUST00000118156 720 ntBASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Gm18027-201ENSMUST00000218947 619 ntBASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ddx41Q91VN6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Gm15678-201ENSMUST00000117573 960 ntBASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ddx41Q91VN6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Ddx41Q91VN6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Mir7654-201ENSMUST00000185082 70 ntBASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ddx41Q91VN6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms