Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Gm7488-201ENSMUST00000117148 684 ntBASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.97□□□□□ -0.01
Rpap2Q8VC34 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Gm26464-201ENSMUST00000157094 305 ntBASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Gm28631-201ENSMUST00000190740 334 ntBASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Gm2423-201ENSMUST00000074863 733 ntBASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpap2Q8VC34 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Gm7063-201ENSMUST00000186840 981 ntBASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Gm19220-201ENSMUST00000222682 803 ntBASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpap2Q8VC34 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpap2Q8VC34 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Rpap2Q8VC34 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpap2Q8VC34 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Rpap2Q8VC34 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Gm15376-201ENSMUST00000122258 783 ntBASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rpap2Q8VC34 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rpap2Q8VC34 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms