Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Gm38225-201ENSMUST00000194001 393 ntBASIC11.12□□□□□ -0.63
Nup35Q8R4R6 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.12□□□□□ -0.63
Nup35Q8R4R6 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nup35Q8R4R6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.11□□□□□ -0.63
Nup35Q8R4R6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Mir698-201ENSMUST00000102164 109 ntBASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Gm45453-201ENSMUST00000211758 853 ntBASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nup35Q8R4R6 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nup35Q8R4R6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 171.3 ms