Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Gm22175-201ENSMUST00000175007 78 ntBASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Gm27321-201ENSMUST00000185021 205 ntBASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Gm43575-201ENSMUST00000196420 516 ntBASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cchcr1Q8K2I2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cchcr1Q8K2I2 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.14■□□□□ 0.18
Cchcr1Q8K2I2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cchcr1Q8K2I2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Gm27618-201ENSMUST00000183671 60 ntBASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Gm43703-201ENSMUST00000200523 763 ntBASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cchcr1Q8K2I2 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Gm6888-201ENSMUST00000221983 706 ntBASIC16.12■□□□□ 0.17
Cchcr1Q8K2I2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms