Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.87■□□□□ 0.29
Smc5Q8CG46 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.86■□□□□ 0.29
Smc5Q8CG46 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.86■□□□□ 0.29
Smc5Q8CG46 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.86■□□□□ 0.29
Smc5Q8CG46 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Ntrk2-204ENSMUST00000224259 3049 ntBASIC16.86■□□□□ 0.29
Smc5Q8CG46 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.86■□□□□ 0.29
Smc5Q8CG46 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smc5Q8CG46 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.85■□□□□ 0.29
Smc5Q8CG46 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.85■□□□□ 0.29
Smc5Q8CG46 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.85■□□□□ 0.29
Smc5Q8CG46 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Gm46209-201ENSMUST00000217912 553 ntBASIC16.85■□□□□ 0.29
Smc5Q8CG46 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.85■□□□□ 0.29
Smc5Q8CG46 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smc5Q8CG46 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Mir449b-201ENSMUST00000104833 80 ntBASIC16.84■□□□□ 0.29
Smc5Q8CG46 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Gm15240-201ENSMUST00000118156 720 ntBASIC16.84■□□□□ 0.29
Smc5Q8CG46 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Smc5Q8CG46 Gm43703-201ENSMUST00000200523 763 ntBASIC16.84■□□□□ 0.29
Smc5Q8CG46 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms