Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm11618-201ENSMUST00000117946 267 ntBASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm19353-201ENSMUST00000184561 445 ntBASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Gm5369-201ENSMUST00000217499 588 ntBASIC11.27□□□□□ -0.61
Smg1Q8BKX6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Gm7003-201ENSMUST00000195089 312 ntBASIC11.26□□□□□ -0.61
Smg1Q8BKX6 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Gm7666-201ENSMUST00000146631 819 ntBASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.26□□□□□ -0.61
Smg1Q8BKX6 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Gm38210-201ENSMUST00000191944 809 ntBASIC11.26□□□□□ -0.61
Smg1Q8BKX6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Gm44967-201ENSMUST00000207047 631 ntBASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Smg1Q8BKX6 Gm8365-201ENSMUST00000197334 648 ntBASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Gm19459-201ENSMUST00000176240 835 ntBASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Smg1Q8BKX6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms