Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Gm7063-201ENSMUST00000186840 981 ntBASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Gm29741-201ENSMUST00000192667 421 ntBASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Gm17795-201ENSMUST00000214505 757 ntBASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.51
Srrm4Q8BKA3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.83□□□□□ -0.51
Srrm4Q8BKA3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Srrm4Q8BKA3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Srrm4Q8BKA3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Gm12859-201ENSMUST00000117834 427 ntBASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Srrm4Q8BKA3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Srrm4Q8BKA3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srrm4Q8BKA3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Srrm4Q8BKA3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms