Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf38Q8BI21 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Gm9824-201ENSMUST00000178707 561 ntBASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Gm16476-201ENSMUST00000221544 139 ntBASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf38Q8BI21 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf38Q8BI21 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms