Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Gm27622-201ENSMUST00000183779 60 ntBASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Rad54bQ6PFE3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Gm7774-201ENSMUST00000200064 533 ntBASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Gm46209-201ENSMUST00000217912 553 ntBASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rad54bQ6PFE3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Mir449b-201ENSMUST00000104833 80 ntBASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Gm12585-201ENSMUST00000117307 290 ntBASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rad54bQ6PFE3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms