Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Gm22323-201ENSMUST00000103832 109 ntBASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Gm14381-201ENSMUST00000122105 414 ntBASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Gm8584-201ENSMUST00000171982 758 ntBASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Gm6222-202ENSMUST00000182143 629 ntBASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.96□□□□□ -0.49
Snrnp40Q6PE01 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Snrnp40Q6PE01 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.96□□□□□ -0.5
Snrnp40Q6PE01 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Snrnp40Q6PE01 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Snrnp40Q6PE01 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Snrnp40Q6PE01 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Snrnp40Q6PE01 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Gm24255-201ENSMUST00000104481 128 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Gm14350-201ENSMUST00000116642 640 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Gm6023-201ENSMUST00000118217 606 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Gm13123-201ENSMUST00000122173 492 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Mir5132-201ENSMUST00000175166 71 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Gm37489-201ENSMUST00000191883 159 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Snrnp40Q6PE01 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Snrnp40Q6PE01 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms