Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 Gm6023-201ENSMUST00000118217 606 ntBASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 Gm43947-201ENSMUST00000203019 959 ntBASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc85bQ6PDY0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Gm13297-201ENSMUST00000120205 934 ntBASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Mir5120-201ENSMUST00000175020 78 ntBASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc85bQ6PDY0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Gm4986-201ENSMUST00000119731 549 ntBASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Gm5523-201ENSMUST00000180415 997 ntBASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Itm2b-204ENSMUST00000228637 783 ntBASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc85bQ6PDY0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc85bQ6PDY0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc85bQ6PDY0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc85bQ6PDY0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc85bQ6PDY0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.15□□□□□ -0.14
Ccdc85bQ6PDY0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc85bQ6PDY0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc85bQ6PDY0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc85bQ6PDY0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc85bQ6PDY0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccdc85bQ6PDY0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms