Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgb4Q6P8W9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Gm15240-201ENSMUST00000118156 720 ntBASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Gm27839-201ENSMUST00000184242 106 ntBASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgb4Q6P8W9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Gm43094-201ENSMUST00000196549 921 ntBASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmgb4Q6P8W9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.27□□□□□ -0.12
Hmgb4Q6P8W9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms