Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scube3Q66PY1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scube3Q66PY1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scube3Q66PY1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scube3Q66PY1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scube3Q66PY1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scube3Q66PY1 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scube3Q66PY1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scube3Q66PY1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Gm12485-201ENSMUST00000119641 291 ntBASIC14.37□□□□□ -0.11
Scube3Q66PY1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.37□□□□□ -0.11
Scube3Q66PY1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Gm26464-201ENSMUST00000157094 305 ntBASIC14.37□□□□□ -0.11
Scube3Q66PY1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.37□□□□□ -0.11
Scube3Q66PY1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scube3Q66PY1 AC154828.2-201ENSMUST00000220908 1070 ntBASIC14.37□□□□□ -0.11
Scube3Q66PY1 AC140209.1-201ENSMUST00000227875 284 ntBASIC14.37□□□□□ -0.11
Scube3Q66PY1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scube3Q66PY1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scube3Q66PY1 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Gm12091-201ENSMUST00000146791 830 ntBASIC14.36□□□□□ -0.11
Scube3Q66PY1 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.36□□□□□ -0.11
Scube3Q66PY1 Gm44719-201ENSMUST00000206404 149 ntBASIC14.36□□□□□ -0.11
Scube3Q66PY1 Gm18307-201ENSMUST00000206864 949 ntBASIC14.36□□□□□ -0.11
Scube3Q66PY1 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.36□□□□□ -0.11
Scube3Q66PY1 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC14.36□□□□□ -0.11
Scube3Q66PY1 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.36□□□□□ -0.11
Scube3Q66PY1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scube3Q66PY1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scube3Q66PY1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scube3Q66PY1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Scube3Q66PY1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Scube3Q66PY1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scube3Q66PY1 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Scube3Q66PY1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scube3Q66PY1 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.35□□□□□ -0.11
Scube3Q66PY1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scube3Q66PY1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scube3Q66PY1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scube3Q66PY1 Gm25509-201ENSMUST00000116985 106 ntBASIC14.35□□□□□ -0.11
Scube3Q66PY1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.35□□□□□ -0.11
Scube3Q66PY1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.35□□□□□ -0.11
Scube3Q66PY1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Scube3Q66PY1 Mir7654-201ENSMUST00000185082 70 ntBASIC14.35□□□□□ -0.11
Scube3Q66PY1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms