Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ctr9Q62018 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.08■□□□□ 0.16
Ctr9Q62018 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
Ctr9Q62018 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ctr9Q62018 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ctr9Q62018 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.08■□□□□ 0.16
Ctr9Q62018 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ctr9Q62018 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
Ctr9Q62018 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.07■□□□□ 0.16
Ctr9Q62018 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ctr9Q62018 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Gm18187-201ENSMUST00000196476 984 ntBASIC16.07■□□□□ 0.16
Ctr9Q62018 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.07■□□□□ 0.16
Ctr9Q62018 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.07■□□□□ 0.16
Ctr9Q62018 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ctr9Q62018 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.07■□□□□ 0.16
Ctr9Q62018 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ctr9Q62018 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Ctr9Q62018 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctr9Q62018 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctr9Q62018 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctr9Q62018 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctr9Q62018 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctr9Q62018 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ctr9Q62018 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctr9Q62018 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.06■□□□□ 0.16
Ctr9Q62018 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctr9Q62018 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.06■□□□□ 0.16
Ctr9Q62018 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctr9Q62018 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Ctr9Q62018 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.06■□□□□ 0.16
Ctr9Q62018 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ctr9Q62018 Gm8602-201ENSMUST00000184045 607 ntBASIC16.06■□□□□ 0.16
Ctr9Q62018 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.06■□□□□ 0.16
Ctr9Q62018 Gm6983-201ENSMUST00000214912 628 ntBASIC16.06■□□□□ 0.16
Ctr9Q62018 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctr9Q62018 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.06■□□□□ 0.16
Ctr9Q62018 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Ctr9Q62018 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Ctr9Q62018 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.06■□□□□ 0.16
Ctr9Q62018 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ctr9Q62018 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctr9Q62018 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ctr9Q62018 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctr9Q62018 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
Ctr9Q62018 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ctr9Q62018 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ctr9Q62018 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Ctr9Q62018 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.05■□□□□ 0.16
Ctr9Q62018 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ctr9Q62018 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ctr9Q62018 Gm12928-201ENSMUST00000117115 573 ntBASIC16.05■□□□□ 0.16
Ctr9Q62018 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Ctr9Q62018 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC16.05■□□□□ 0.16
Ctr9Q62018 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Gm6244-201ENSMUST00000178732 841 ntBASIC16.05■□□□□ 0.16
Ctr9Q62018 Gm27892-201ENSMUST00000185017 106 ntBASIC16.05■□□□□ 0.16
Ctr9Q62018 Gm38223-201ENSMUST00000194484 695 ntBASIC16.05■□□□□ 0.16
Ctr9Q62018 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.05■□□□□ 0.16
Ctr9Q62018 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ctr9Q62018 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Ctr9Q62018 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ctr9Q62018 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
Ctr9Q62018 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ctr9Q62018 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ctr9Q62018 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ctr9Q62018 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms