Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.32□□□□□ -0.28
Vsx2Q61412 Syt7-205ENSMUST00000224135 1557 ntBASIC13.32□□□□□ -0.28
Vsx2Q61412 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vsx2Q61412 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.32□□□□□ -0.28
Vsx2Q61412 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Vsx2Q61412 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Vsx2Q61412 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vsx2Q61412 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.32□□□□□ -0.28
Vsx2Q61412 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.32□□□□□ -0.28
Vsx2Q61412 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Vsx2Q61412 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Vsx2Q61412 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.32□□□□□ -0.28
Vsx2Q61412 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vsx2Q61412 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.32□□□□□ -0.28
Vsx2Q61412 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vsx2Q61412 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.31□□□□□ -0.28
Vsx2Q61412 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.31□□□□□ -0.28
Vsx2Q61412 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Vsx2Q61412 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.31□□□□□ -0.28
Vsx2Q61412 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vsx2Q61412 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.31□□□□□ -0.28
Vsx2Q61412 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Vsx2Q61412 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.31□□□□□ -0.28
Vsx2Q61412 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.31□□□□□ -0.28
Vsx2Q61412 Gm7063-201ENSMUST00000186840 981 ntBASIC13.31□□□□□ -0.28
Vsx2Q61412 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.31□□□□□ -0.28
Vsx2Q61412 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vsx2Q61412 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.31□□□□□ -0.28
Vsx2Q61412 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vsx2Q61412 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.31□□□□□ -0.28
Vsx2Q61412 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.31□□□□□ -0.28
Vsx2Q61412 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vsx2Q61412 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vsx2Q61412 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vsx2Q61412 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vsx2Q61412 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Vsx2Q61412 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vsx2Q61412 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vsx2Q61412 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vsx2Q61412 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Vsx2Q61412 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.3□□□□□ -0.28
Vsx2Q61412 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vsx2Q61412 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms