Protein–RNA interactions for Protein: Q60765

Atf3, Cyclic AMP-dependent transcription factor ATF-3, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf3Q60765 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atf3Q60765 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Gm14208-201ENSMUST00000119645 678 ntBASIC18.12■□□□□ 0.49
Atf3Q60765 Gm13665-201ENSMUST00000120830 528 ntBASIC18.12■□□□□ 0.49
Atf3Q60765 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Atf3Q60765 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Gm8584-201ENSMUST00000171982 758 ntBASIC18.12■□□□□ 0.49
Atf3Q60765 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC18.12■□□□□ 0.49
Atf3Q60765 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC18.12■□□□□ 0.49
Atf3Q60765 AC153974.2-201ENSMUST00000218577 1025 ntBASIC18.12■□□□□ 0.49
Atf3Q60765 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Atf3Q60765 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC18.12■□□□□ 0.49
Atf3Q60765 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atf3Q60765 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf3Q60765 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf3Q60765 Gm12502-201ENSMUST00000120197 444 ntBASIC18.11■□□□□ 0.49
Atf3Q60765 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC18.11■□□□□ 0.49
Atf3Q60765 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC18.11■□□□□ 0.49
Atf3Q60765 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC18.11■□□□□ 0.49
Atf3Q60765 AC122305.4-201ENSMUST00000216159 1206 ntBASIC18.11■□□□□ 0.49
Atf3Q60765 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf3Q60765 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf3Q60765 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC18.11■□□□□ 0.49
Atf3Q60765 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atf3Q60765 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf3Q60765 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atf3Q60765 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf3Q60765 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf3Q60765 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf3Q60765 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atf3Q60765 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atf3Q60765 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Atf3Q60765 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Atf3Q60765 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Atf3Q60765 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC18.1■□□□□ 0.49
Atf3Q60765 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Gm8546-201ENSMUST00000178288 1264 ntBASIC18.1■□□□□ 0.49
Atf3Q60765 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Gm28450-201ENSMUST00000187349 638 ntBASIC18.1■□□□□ 0.49
Atf3Q60765 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Atf3Q60765 Gm28693-202ENSMUST00000190758 331 ntBASIC18.1■□□□□ 0.49
Atf3Q60765 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC18.1■□□□□ 0.49
Atf3Q60765 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC18.1■□□□□ 0.49
Atf3Q60765 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC18.1■□□□□ 0.49
Atf3Q60765 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Atf3Q60765 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC18.1■□□□□ 0.49
Atf3Q60765 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.1■□□□□ 0.49
Atf3Q60765 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atf3Q60765 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf3Q60765 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Atf3Q60765 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC18.09■□□□□ 0.49
Atf3Q60765 Gm12616-201ENSMUST00000118594 382 ntBASIC18.09■□□□□ 0.49
Atf3Q60765 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC18.09■□□□□ 0.49
Atf3Q60765 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atf3Q60765 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC18.09■□□□□ 0.49
Atf3Q60765 Gm12624-201ENSMUST00000177615 382 ntBASIC18.09■□□□□ 0.49
Atf3Q60765 Gm12621-201ENSMUST00000177760 382 ntBASIC18.09■□□□□ 0.49
Atf3Q60765 Gm12615-201ENSMUST00000177970 382 ntBASIC18.09■□□□□ 0.49
Atf3Q60765 Gm12622-201ENSMUST00000177975 382 ntBASIC18.09■□□□□ 0.49
Atf3Q60765 Gm12627-201ENSMUST00000178412 382 ntBASIC18.09■□□□□ 0.49
Atf3Q60765 Gm12625-201ENSMUST00000179122 382 ntBASIC18.09■□□□□ 0.49
Atf3Q60765 Gm12614-201ENSMUST00000179586 382 ntBASIC18.09■□□□□ 0.49
Atf3Q60765 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Atf3Q60765 Gm12613-201ENSMUST00000180323 382 ntBASIC18.09■□□□□ 0.49
Atf3Q60765 Gm10109-202ENSMUST00000206890 1211 ntBASIC18.09■□□□□ 0.49
Atf3Q60765 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC18.09■□□□□ 0.49
Atf3Q60765 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC18.09■□□□□ 0.49
Atf3Q60765 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Atf3Q60765 Gm14267-206ENSMUST00000226870 1209 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms