Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Gm43868-201ENSMUST00000205187 2114 ntBASIC13□□□□□ -0.33
Nr1h4Q60641 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nr1h4Q60641 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Gm37660-201ENSMUST00000192754 1732 ntBASIC13□□□□□ -0.33
Nr1h4Q60641 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nr1h4Q60641 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13□□□□□ -0.33
Nr1h4Q60641 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13□□□□□ -0.33
Nr1h4Q60641 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13□□□□□ -0.33
Nr1h4Q60641 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13□□□□□ -0.33
Nr1h4Q60641 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13□□□□□ -0.33
Nr1h4Q60641 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nr1h4Q60641 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nr1h4Q60641 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nr1h4Q60641 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13□□□□□ -0.33
Nr1h4Q60641 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Nr1h4Q60641 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nr1h4Q60641 Gm8337-201ENSMUST00000187358 1938 ntBASIC13□□□□□ -0.33
Nr1h4Q60641 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.99□□□□□ -0.33
Nr1h4Q60641 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.99□□□□□ -0.33
Nr1h4Q60641 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.99□□□□□ -0.33
Nr1h4Q60641 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nr1h4Q60641 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.98□□□□□ -0.33
Nr1h4Q60641 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.98□□□□□ -0.33
Nr1h4Q60641 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.98□□□□□ -0.33
Nr1h4Q60641 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms