Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shroom1Q5SX79 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Gm15371-201ENSMUST00000117057 784 ntBASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Gm12485-201ENSMUST00000119641 291 ntBASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Gm43630-201ENSMUST00000201550 776 ntBASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Gm6983-201ENSMUST00000214912 628 ntBASIC14.51□□□□□ -0.09
Shroom1Q5SX79 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Shroom1Q5SX79 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Shroom1Q5SX79 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Mir698-201ENSMUST00000102164 109 ntBASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Shroom1Q5SX79 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms