Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.56□□□□□ -0.4
Urb1Q571H0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Gm6023-201ENSMUST00000118217 606 ntBASIC12.56□□□□□ -0.4
Urb1Q571H0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.56□□□□□ -0.4
Urb1Q571H0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Gm24420-201ENSMUST00000176676 59 ntBASIC12.56□□□□□ -0.4
Urb1Q571H0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Urb1Q571H0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.56□□□□□ -0.4
Urb1Q571H0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.56□□□□□ -0.4
Urb1Q571H0 Gm44397-201ENSMUST00000195950 113 ntBASIC12.56□□□□□ -0.4
Urb1Q571H0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.56□□□□□ -0.4
Urb1Q571H0 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.56□□□□□ -0.4
Urb1Q571H0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.56□□□□□ -0.4
Urb1Q571H0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Urb1Q571H0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Urb1Q571H0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.56□□□□□ -0.4
Urb1Q571H0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.55□□□□□ -0.4
Urb1Q571H0 Gm26083-201ENSMUST00000157904 193 ntBASIC12.55□□□□□ -0.4
Urb1Q571H0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.55□□□□□ -0.4
Urb1Q571H0 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.55□□□□□ -0.4
Urb1Q571H0 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.55□□□□□ -0.4
Urb1Q571H0 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.55□□□□□ -0.4
Urb1Q571H0 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.55□□□□□ -0.4
Urb1Q571H0 Mir497b-201ENSMUST00000093601 125 ntBASIC12.55□□□□□ -0.4
Urb1Q571H0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Urb1Q571H0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.55□□□□□ -0.4
Urb1Q571H0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.55□□□□□ -0.4
Urb1Q571H0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Gm4271-201ENSMUST00000174444 973 ntBASIC12.55□□□□□ -0.4
Urb1Q571H0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.55□□□□□ -0.4
Urb1Q571H0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.55□□□□□ -0.4
Urb1Q571H0 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Urb1Q571H0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Urb1Q571H0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.54□□□□□ -0.4
Urb1Q571H0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Urb1Q571H0 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.54□□□□□ -0.4
Urb1Q571H0 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.54□□□□□ -0.4
Urb1Q571H0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Urb1Q571H0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Urb1Q571H0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Urb1Q571H0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Urb1Q571H0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms