Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Scn2bQ56A07 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.51□□□□□ -0.25
Scn2bQ56A07 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Gm24543-201ENSMUST00000103867 82 ntBASIC13.51□□□□□ -0.25
Scn2bQ56A07 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Gm10576-201ENSMUST00000191927 825 ntBASIC13.51□□□□□ -0.25
Scn2bQ56A07 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Gm6916-202ENSMUST00000205523 195 ntBASIC13.51□□□□□ -0.25
Scn2bQ56A07 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.5□□□□□ -0.25
Scn2bQ56A07 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Scn2bQ56A07 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Gm27618-201ENSMUST00000183671 60 ntBASIC13.49□□□□□ -0.25
Scn2bQ56A07 Gm28630-201ENSMUST00000187806 498 ntBASIC13.49□□□□□ -0.25
Scn2bQ56A07 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.49□□□□□ -0.25
Scn2bQ56A07 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.49□□□□□ -0.25
Scn2bQ56A07 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.49□□□□□ -0.25
Scn2bQ56A07 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn2bQ56A07 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms