Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.84□□□□□ -0.51
Q3U1D9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Q3U1D9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.84□□□□□ -0.51
Q3U1D9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.84□□□□□ -0.51
Q3U1D9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.84□□□□□ -0.51
Q3U1D9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Gm38144-201ENSMUST00000192790 465 ntBASIC11.84□□□□□ -0.51
Q3U1D9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.84□□□□□ -0.51
Q3U1D9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.84□□□□□ -0.51
Q3U1D9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Q3U1D9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.84□□□□□ -0.51
Q3U1D9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.84□□□□□ -0.51
Q3U1D9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Q3U1D9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Q3U1D9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.83□□□□□ -0.51
Q3U1D9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.83□□□□□ -0.52
Q3U1D9 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.83□□□□□ -0.52
Q3U1D9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.83□□□□□ -0.52
Q3U1D9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.83□□□□□ -0.52
Q3U1D9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.83□□□□□ -0.52
Q3U1D9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Gm13612-201ENSMUST00000119276 390 ntBASIC11.83□□□□□ -0.52
Q3U1D9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.83□□□□□ -0.52
Q3U1D9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.83□□□□□ -0.52
Q3U1D9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.83□□□□□ -0.52
Q3U1D9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.83□□□□□ -0.52
Q3U1D9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.83□□□□□ -0.52
Q3U1D9 Gm27847-201ENSMUST00000183711 107 ntBASIC11.83□□□□□ -0.52
Q3U1D9 Gm27375-201ENSMUST00000183799 107 ntBASIC11.83□□□□□ -0.52
Q3U1D9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.83□□□□□ -0.52
Q3U1D9 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.83□□□□□ -0.52
Q3U1D9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.83□□□□□ -0.52
Q3U1D9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Q3U1D9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Q3U1D9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Q3U1D9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.83□□□□□ -0.52
Q3U1D9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Q3U1D9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Q3U1D9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Q3U1D9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Q3U1D9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Q3U1D9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Q3U1D9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Q3U1D9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.82□□□□□ -0.52
Q3U1D9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Q3U1D9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Q3U1D9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Q3U1D9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Q3U1D9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Q3U1D9 Gm12390-201ENSMUST00000117897 397 ntBASIC11.82□□□□□ -0.52
Q3U1D9 Gm11425-201ENSMUST00000119608 498 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms