Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.41□□□□□ -0.26
Col9a1Q05722 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm25604-201ENSMUST00000158359 133 ntBASIC13.41□□□□□ -0.26
Col9a1Q05722 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm9555-201ENSMUST00000200908 583 ntBASIC13.41□□□□□ -0.26
Col9a1Q05722 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC13.41□□□□□ -0.26
Col9a1Q05722 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col9a1Q05722 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.41□□□□□ -0.26
Col9a1Q05722 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col9a1Q05722 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.4□□□□□ -0.26
Col9a1Q05722 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Col9a1Q05722 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Gm23270-201ENSMUST00000104055 131 ntBASIC13.4□□□□□ -0.26
Col9a1Q05722 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Col9a1Q05722 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.4□□□□□ -0.26
Col9a1Q05722 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.4□□□□□ -0.26
Col9a1Q05722 Gm15432-201ENSMUST00000121106 195 ntBASIC13.4□□□□□ -0.26
Col9a1Q05722 Gm11233-201ENSMUST00000122357 634 ntBASIC13.4□□□□□ -0.26
Col9a1Q05722 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.4□□□□□ -0.26
Col9a1Q05722 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC13.4□□□□□ -0.26
Col9a1Q05722 Gm27552-201ENSMUST00000183351 62 ntBASIC13.4□□□□□ -0.26
Col9a1Q05722 Gm27844-201ENSMUST00000183613 62 ntBASIC13.4□□□□□ -0.26
Col9a1Q05722 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.4□□□□□ -0.26
Col9a1Q05722 Gm37845-201ENSMUST00000194977 355 ntBASIC13.4□□□□□ -0.26
Col9a1Q05722 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Col9a1Q05722 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.4□□□□□ -0.26
Col9a1Q05722 AC117797.1-201ENSMUST00000223977 695 ntBASIC13.4□□□□□ -0.26
Col9a1Q05722 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col9a1Q05722 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col9a1Q05722 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col9a1Q05722 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col9a1Q05722 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col9a1Q05722 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.39□□□□□ -0.27
Col9a1Q05722 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col9a1Q05722 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col9a1Q05722 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Col9a1Q05722 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.39□□□□□ -0.27
Col9a1Q05722 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.39□□□□□ -0.27
Col9a1Q05722 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.39□□□□□ -0.27
Col9a1Q05722 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col9a1Q05722 Gm19287-201ENSMUST00000203190 358 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms