Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.91□□□□□ -0.18
Thumpd3P97770 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.91□□□□□ -0.18
Thumpd3P97770 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Thumpd3P97770 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Thumpd3P97770 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Thumpd3P97770 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Thumpd3P97770 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Thumpd3P97770 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Thumpd3P97770 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Thumpd3P97770 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Thumpd3P97770 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.91□□□□□ -0.18
Thumpd3P97770 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Thumpd3P97770 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Thumpd3P97770 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Thumpd3P97770 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Thumpd3P97770 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Thumpd3P97770 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Thumpd3P97770 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.9□□□□□ -0.18
Thumpd3P97770 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Thumpd3P97770 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Thumpd3P97770 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Thumpd3P97770 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Thumpd3P97770 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Thumpd3P97770 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Thumpd3P97770 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Thumpd3P97770 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.9□□□□□ -0.18
Thumpd3P97770 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.9□□□□□ -0.18
Thumpd3P97770 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Thumpd3P97770 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Thumpd3P97770 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Thumpd3P97770 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Thumpd3P97770 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.9□□□□□ -0.18
Thumpd3P97770 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Thumpd3P97770 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Thumpd3P97770 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Thumpd3P97770 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.89□□□□□ -0.19
Thumpd3P97770 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Thumpd3P97770 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Thumpd3P97770 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Thumpd3P97770 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Thumpd3P97770 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Gm13453-201ENSMUST00000118708 357 ntBASIC13.89□□□□□ -0.19
Thumpd3P97770 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.89□□□□□ -0.19
Thumpd3P97770 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Thumpd3P97770 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.89□□□□□ -0.19
Thumpd3P97770 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.89□□□□□ -0.19
Thumpd3P97770 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.89□□□□□ -0.19
Thumpd3P97770 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Thumpd3P97770 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Thumpd3P97770 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Thumpd3P97770 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.89□□□□□ -0.19
Thumpd3P97770 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Thumpd3P97770 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.88□□□□□ -0.19
Thumpd3P97770 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Thumpd3P97770 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.88□□□□□ -0.19
Thumpd3P97770 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.88□□□□□ -0.19
Thumpd3P97770 Gm27989-201ENSMUST00000184721 107 ntBASIC13.88□□□□□ -0.19
Thumpd3P97770 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.88□□□□□ -0.19
Thumpd3P97770 Gm29541-201ENSMUST00000191351 678 ntBASIC13.88□□□□□ -0.19
Thumpd3P97770 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.88□□□□□ -0.19
Thumpd3P97770 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Thumpd3P97770 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Thumpd3P97770 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms