Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Npas1P97459 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.45□□□□□ -0.58
Npas1P97459 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Npas1P97459 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.45□□□□□ -0.58
Npas1P97459 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Npas1P97459 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Npas1P97459 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.45□□□□□ -0.58
Npas1P97459 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Npas1P97459 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Npas1P97459 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.45□□□□□ -0.58
Npas1P97459 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Npas1P97459 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Npas1P97459 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Npas1P97459 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Npas1P97459 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.44□□□□□ -0.58
Npas1P97459 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Npas1P97459 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Npas1P97459 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Npas1P97459 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Gm5479-201ENSMUST00000160578 435 ntBASIC11.44□□□□□ -0.58
Npas1P97459 Gm5177-201ENSMUST00000183092 997 ntBASIC11.44□□□□□ -0.58
Npas1P97459 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.44□□□□□ -0.58
Npas1P97459 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Npas1P97459 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Npas1P97459 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Npas1P97459 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Npas1P97459 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Npas1P97459 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Npas1P97459 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.43□□□□□ -0.58
Npas1P97459 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Gm9385-201ENSMUST00000117563 472 ntBASIC11.43□□□□□ -0.58
Npas1P97459 Gm13884-201ENSMUST00000118103 829 ntBASIC11.43□□□□□ -0.58
Npas1P97459 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.43□□□□□ -0.58
Npas1P97459 Mir5131-201ENSMUST00000175426 93 ntBASIC11.43□□□□□ -0.58
Npas1P97459 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Gm5864-201ENSMUST00000202263 970 ntBASIC11.43□□□□□ -0.58
Npas1P97459 Thap2-203ENSMUST00000218989 527 ntBASIC11.43□□□□□ -0.58
Npas1P97459 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Npas1P97459 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms