Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm3287-205ENSMUST00000228893 1332 ntBASIC9.03□□□□□ -0.96
PrkdcP97313 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC9.03□□□□□ -0.96
PrkdcP97313 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC9.03□□□□□ -0.96
PrkdcP97313 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Gm6963-201ENSMUST00000147879 379 ntBASIC9.03□□□□□ -0.96
PrkdcP97313 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC9.03□□□□□ -0.96
PrkdcP97313 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
PrkdcP97313 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.03□□□□□ -0.96
PrkdcP97313 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
PrkdcP97313 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.03□□□□□ -0.96
PrkdcP97313 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.03□□□□□ -0.96
PrkdcP97313 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
PrkdcP97313 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
PrkdcP97313 AC159205.5-202ENSMUST00000224849 386 ntBASIC9.03□□□□□ -0.96
PrkdcP97313 AC163667.3-201ENSMUST00000225774 222 ntBASIC9.03□□□□□ -0.96
PrkdcP97313 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC9.03□□□□□ -0.96
PrkdcP97313 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
PrkdcP97313 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Gm5434-202ENSMUST00000222384 1451 ntBASIC9.03□□□□□ -0.96
PrkdcP97313 Gm5434-201ENSMUST00000071825 1451 ntBASIC9.03□□□□□ -0.96
PrkdcP97313 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
PrkdcP97313 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
PrkdcP97313 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
PrkdcP97313 Gm38102-201ENSMUST00000192791 1935 ntBASIC9.02□□□□□ -0.96
PrkdcP97313 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
PrkdcP97313 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
PrkdcP97313 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
PrkdcP97313 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
PrkdcP97313 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
PrkdcP97313 Gm19091-201ENSMUST00000208120 978 ntBASIC9.02□□□□□ -0.97
PrkdcP97313 Arhgef33-210ENSMUST00000225548 456 ntBASIC9.02□□□□□ -0.97
PrkdcP97313 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
PrkdcP97313 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC9.02□□□□□ -0.97
PrkdcP97313 Gm15881-201ENSMUST00000148792 942 ntBASIC9.02□□□□□ -0.97
PrkdcP97313 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
PrkdcP97313 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
PrkdcP97313 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
PrkdcP97313 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
PrkdcP97313 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
PrkdcP97313 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
PrkdcP97313 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
PrkdcP97313 CT025602.2-201ENSMUST00000226553 772 ntBASIC9.02□□□□□ -0.97
PrkdcP97313 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
PrkdcP97313 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Gm12628-201ENSMUST00000122193 382 ntBASIC9.02□□□□□ -0.97
PrkdcP97313 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC9.02□□□□□ -0.97
PrkdcP97313 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC9.02□□□□□ -0.97
PrkdcP97313 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC9.02□□□□□ -0.97
PrkdcP97313 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PrkdcP97313 Gm43205-201ENSMUST00000198622 1968 ntBASIC9.02□□□□□ -0.97
PrkdcP97313 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC9.02□□□□□ -0.97
PrkdcP97313 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
PrkdcP97313 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms