Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SgcbP82349 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SgcbP82349 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.17□□□□□ -0.46
SgcbP82349 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.17□□□□□ -0.46
SgcbP82349 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
SgcbP82349 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.17□□□□□ -0.46
SgcbP82349 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.17□□□□□ -0.46
SgcbP82349 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC12.17□□□□□ -0.46
SgcbP82349 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
SgcbP82349 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.17□□□□□ -0.46
SgcbP82349 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.17□□□□□ -0.46
SgcbP82349 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.17□□□□□ -0.46
SgcbP82349 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Gm18624-201ENSMUST00000220966 658 ntBASIC12.17□□□□□ -0.46
SgcbP82349 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.17□□□□□ -0.46
SgcbP82349 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
SgcbP82349 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.17□□□□□ -0.46
SgcbP82349 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SgcbP82349 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SgcbP82349 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SgcbP82349 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SgcbP82349 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SgcbP82349 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.17□□□□□ -0.46
SgcbP82349 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SgcbP82349 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcbP82349 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SgcbP82349 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
SgcbP82349 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SgcbP82349 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.16□□□□□ -0.46
SgcbP82349 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Gm14928-201ENSMUST00000120198 477 ntBASIC12.16□□□□□ -0.46
SgcbP82349 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.16□□□□□ -0.46
SgcbP82349 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.16□□□□□ -0.46
SgcbP82349 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.16□□□□□ -0.46
SgcbP82349 Gm8515-201ENSMUST00000194852 576 ntBASIC12.16□□□□□ -0.46
SgcbP82349 Gm43094-201ENSMUST00000196549 921 ntBASIC12.16□□□□□ -0.46
SgcbP82349 Gm18018-201ENSMUST00000198273 408 ntBASIC12.16□□□□□ -0.46
SgcbP82349 Gm43371-201ENSMUST00000202838 1031 ntBASIC12.16□□□□□ -0.46
SgcbP82349 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.16□□□□□ -0.46
SgcbP82349 Gm44719-201ENSMUST00000206404 149 ntBASIC12.16□□□□□ -0.46
SgcbP82349 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.16□□□□□ -0.46
SgcbP82349 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SgcbP82349 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcbP82349 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.16□□□□□ -0.46
SgcbP82349 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.16□□□□□ -0.46
SgcbP82349 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 196.8 ms