Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.41□□□□□ -0.1
Shmt1P50431 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Shmt1P50431 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Shmt1P50431 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.41□□□□□ -0.1
Shmt1P50431 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.41□□□□□ -0.1
Shmt1P50431 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Shmt1P50431 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.41□□□□□ -0.1
Shmt1P50431 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.41□□□□□ -0.1
Shmt1P50431 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Shmt1P50431 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.41□□□□□ -0.1
Shmt1P50431 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.41□□□□□ -0.1
Shmt1P50431 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.41□□□□□ -0.1
Shmt1P50431 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.41□□□□□ -0.1
Shmt1P50431 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Shmt1P50431 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Shmt1P50431 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Shmt1P50431 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Shmt1P50431 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.4□□□□□ -0.1
Shmt1P50431 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.4□□□□□ -0.1
Shmt1P50431 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.4□□□□□ -0.1
Shmt1P50431 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.4□□□□□ -0.1
Shmt1P50431 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
Shmt1P50431 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.4□□□□□ -0.1
Shmt1P50431 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.4□□□□□ -0.1
Shmt1P50431 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.4□□□□□ -0.1
Shmt1P50431 Gm44719-201ENSMUST00000206404 149 ntBASIC14.4□□□□□ -0.1
Shmt1P50431 Gm8463-201ENSMUST00000208573 613 ntBASIC14.4□□□□□ -0.1
Shmt1P50431 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.4□□□□□ -0.1
Shmt1P50431 Gm17330-201ENSMUST00000221047 165 ntBASIC14.4□□□□□ -0.1
Shmt1P50431 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Shmt1P50431 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Shmt1P50431 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.4□□□□□ -0.1
Shmt1P50431 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shmt1P50431 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt1P50431 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt1P50431 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt1P50431 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt1P50431 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt1P50431 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt1P50431 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.39□□□□□ -0.11
Shmt1P50431 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt1P50431 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt1P50431 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt1P50431 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.39□□□□□ -0.11
Shmt1P50431 Gm15806-201ENSMUST00000120696 955 ntBASIC14.39□□□□□ -0.11
Shmt1P50431 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt1P50431 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.39□□□□□ -0.11
Shmt1P50431 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Shmt1P50431 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Shmt1P50431 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt1P50431 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt1P50431 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shmt1P50431 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Shmt1P50431 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms