Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
GdnfP48540 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
GdnfP48540 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
GdnfP48540 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.97□□□□□ -0.49
GdnfP48540 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
GdnfP48540 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
GdnfP48540 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Gm13015-201ENSMUST00000118674 204 ntBASIC11.97□□□□□ -0.49
GdnfP48540 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC11.97□□□□□ -0.49
GdnfP48540 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
GdnfP48540 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.97□□□□□ -0.49
GdnfP48540 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.97□□□□□ -0.49
GdnfP48540 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.97□□□□□ -0.49
GdnfP48540 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
GdnfP48540 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
GdnfP48540 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
GdnfP48540 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.96□□□□□ -0.49
GdnfP48540 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
GdnfP48540 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
GdnfP48540 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
GdnfP48540 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
GdnfP48540 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
GdnfP48540 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
GdnfP48540 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
GdnfP48540 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.96□□□□□ -0.49
GdnfP48540 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
GdnfP48540 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.96□□□□□ -0.49
GdnfP48540 Gm18737-201ENSMUST00000173594 937 ntBASIC11.96□□□□□ -0.49
GdnfP48540 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.96□□□□□ -0.49
GdnfP48540 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.96□□□□□ -0.49
GdnfP48540 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.96□□□□□ -0.49
GdnfP48540 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.96□□□□□ -0.49
GdnfP48540 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.96□□□□□ -0.49
GdnfP48540 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.96□□□□□ -0.49
GdnfP48540 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
GdnfP48540 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
GdnfP48540 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.96□□□□□ -0.49
GdnfP48540 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
GdnfP48540 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
GdnfP48540 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
GdnfP48540 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
GdnfP48540 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
GdnfP48540 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
GdnfP48540 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
GdnfP48540 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.5
GdnfP48540 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.96□□□□□ -0.5
GdnfP48540 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.95□□□□□ -0.5
GdnfP48540 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
GdnfP48540 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
GdnfP48540 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
GdnfP48540 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.95□□□□□ -0.5
GdnfP48540 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.95□□□□□ -0.5
GdnfP48540 Gm21156-201ENSMUST00000189693 869 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms