Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prox1P48437 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Prox1P48437 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Prox1P48437 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prox1P48437 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Prox1P48437 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prox1P48437 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prox1P48437 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prox1P48437 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prox1P48437 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.1□□□□□ -0.31
Prox1P48437 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.1□□□□□ -0.31
Prox1P48437 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.1□□□□□ -0.31
Prox1P48437 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.1□□□□□ -0.31
Prox1P48437 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.1□□□□□ -0.31
Prox1P48437 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Prox1P48437 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.1□□□□□ -0.31
Prox1P48437 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.1□□□□□ -0.31
Prox1P48437 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prox1P48437 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Prox1P48437 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.1□□□□□ -0.31
Prox1P48437 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Prox1P48437 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Prox1P48437 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Prox1P48437 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.09□□□□□ -0.31
Prox1P48437 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Prox1P48437 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Prox1P48437 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.09□□□□□ -0.31
Prox1P48437 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prox1P48437 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Prox1P48437 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Prox1P48437 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Prox1P48437 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Prox1P48437 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.31
Prox1P48437 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.08□□□□□ -0.32
Prox1P48437 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Prox1P48437 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Prox1P48437 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Gm23935-201ENSMUST00000102303 57 ntBASIC13.08□□□□□ -0.32
Prox1P48437 Gm24270-201ENSMUST00000102326 57 ntBASIC13.08□□□□□ -0.32
Prox1P48437 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.08□□□□□ -0.32
Prox1P48437 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Gm24245-201ENSMUST00000157318 57 ntBASIC13.08□□□□□ -0.32
Prox1P48437 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.08□□□□□ -0.32
Prox1P48437 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Prox1P48437 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Prox1P48437 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Prox1P48437 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.08□□□□□ -0.32
Prox1P48437 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prox1P48437 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms