Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm15824-201ENSMUST00000119516 955 ntBASIC14.3□□□□□ -0.12
Rfx2P48379 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.3□□□□□ -0.12
Rfx2P48379 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.3□□□□□ -0.12
Rfx2P48379 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.3□□□□□ -0.12
Rfx2P48379 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.3□□□□□ -0.12
Rfx2P48379 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.3□□□□□ -0.12
Rfx2P48379 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Gm24420-201ENSMUST00000176676 59 ntBASIC14.3□□□□□ -0.12
Rfx2P48379 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Gm8602-201ENSMUST00000184045 607 ntBASIC14.3□□□□□ -0.12
Rfx2P48379 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.3□□□□□ -0.12
Rfx2P48379 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.3□□□□□ -0.12
Rfx2P48379 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.3□□□□□ -0.12
Rfx2P48379 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rfx2P48379 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rfx2P48379 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Rfx2P48379 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rfx2P48379 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rfx2P48379 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.29□□□□□ -0.12
Rfx2P48379 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rfx2P48379 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.29□□□□□ -0.12
Rfx2P48379 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.29□□□□□ -0.12
Rfx2P48379 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Gm43438-201ENSMUST00000198133 379 ntBASIC14.29□□□□□ -0.12
Rfx2P48379 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.29□□□□□ -0.12
Rfx2P48379 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.29□□□□□ -0.12
Rfx2P48379 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.29□□□□□ -0.12
Rfx2P48379 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.29□□□□□ -0.12
Rfx2P48379 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Rfx2P48379 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rfx2P48379 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.29□□□□□ -0.12
Rfx2P48379 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rfx2P48379 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.29□□□□□ -0.12
Rfx2P48379 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rfx2P48379 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Rfx2P48379 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Rfx2P48379 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rfx2P48379 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.29□□□□□ -0.12
Rfx2P48379 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx2P48379 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Rfx2P48379 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rfx2P48379 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rfx2P48379 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.28□□□□□ -0.12
Rfx2P48379 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Gm13385-201ENSMUST00000121089 220 ntBASIC14.28□□□□□ -0.12
Rfx2P48379 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.28□□□□□ -0.12
Rfx2P48379 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.28□□□□□ -0.12
Rfx2P48379 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rfx2P48379 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.28□□□□□ -0.12
Rfx2P48379 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.28□□□□□ -0.12
Rfx2P48379 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.28□□□□□ -0.12
Rfx2P48379 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rfx2P48379 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Rfx2P48379 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.28□□□□□ -0.12
Rfx2P48379 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.28□□□□□ -0.12
Rfx2P48379 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Rfx2P48379 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rfx2P48379 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms