Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.86□□□□□ -0.19
Vps4bP46467 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Vps4bP46467 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps4bP46467 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps4bP46467 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Vps4bP46467 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Vps4bP46467 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vps4bP46467 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Vps4bP46467 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.85□□□□□ -0.19
Vps4bP46467 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.85□□□□□ -0.19
Vps4bP46467 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps4bP46467 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Vps4bP46467 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vps4bP46467 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps4bP46467 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.85□□□□□ -0.19
Vps4bP46467 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vps4bP46467 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps4bP46467 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Vps4bP46467 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.84□□□□□ -0.19
Vps4bP46467 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.84□□□□□ -0.19
Vps4bP46467 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.84□□□□□ -0.19
Vps4bP46467 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.84□□□□□ -0.19
Vps4bP46467 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.84□□□□□ -0.19
Vps4bP46467 Gm15393-201ENSMUST00000120499 219 ntBASIC13.84□□□□□ -0.19
Vps4bP46467 Gm11424-201ENSMUST00000121929 829 ntBASIC13.84□□□□□ -0.19
Vps4bP46467 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.84□□□□□ -0.19
Vps4bP46467 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Gm27533-201ENSMUST00000183800 152 ntBASIC13.84□□□□□ -0.19
Vps4bP46467 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.84□□□□□ -0.19
Vps4bP46467 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.84□□□□□ -0.19
Vps4bP46467 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vps4bP46467 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vps4bP46467 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Vps4bP46467 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps4bP46467 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Vps4bP46467 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Vps4bP46467 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vps4bP46467 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vps4bP46467 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps4bP46467 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Vps4bP46467 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps4bP46467 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vps4bP46467 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps4bP46467 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vps4bP46467 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vps4bP46467 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms