Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.15□□□□□ -0.14
HttP42859 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.15□□□□□ -0.14
HttP42859 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.15□□□□□ -0.14
HttP42859 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.15□□□□□ -0.14
HttP42859 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.15□□□□□ -0.14
HttP42859 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.15□□□□□ -0.14
HttP42859 Gm3028-201ENSMUST00000213805 1119 ntBASIC14.15□□□□□ -0.14
HttP42859 Gm19640-201ENSMUST00000214849 464 ntBASIC14.15□□□□□ -0.14
HttP42859 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.15□□□□□ -0.14
HttP42859 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
HttP42859 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HttP42859 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.15□□□□□ -0.14
HttP42859 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
HttP42859 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HttP42859 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.14□□□□□ -0.15
HttP42859 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.14□□□□□ -0.15
HttP42859 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 Gm22138-201ENSMUST00000158748 128 ntBASIC14.14□□□□□ -0.15
HttP42859 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.14□□□□□ -0.15
HttP42859 Gm9358-201ENSMUST00000183067 927 ntBASIC14.14□□□□□ -0.15
HttP42859 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HttP42859 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HttP42859 Mir1901-201ENSMUST00000122616 78 ntBASIC14.14□□□□□ -0.15
HttP42859 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.14□□□□□ -0.15
HttP42859 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.14□□□□□ -0.15
HttP42859 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HttP42859 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.14□□□□□ -0.15
HttP42859 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HttP42859 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HttP42859 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HttP42859 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HttP42859 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.13□□□□□ -0.15
HttP42859 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.13□□□□□ -0.15
HttP42859 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.13□□□□□ -0.15
HttP42859 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.13□□□□□ -0.15
HttP42859 AC140375.1-201ENSMUST00000225421 694 ntBASIC14.13□□□□□ -0.15
HttP42859 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14.13□□□□□ -0.15
HttP42859 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.13□□□□□ -0.15
HttP42859 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.13□□□□□ -0.15
HttP42859 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.13□□□□□ -0.15
HttP42859 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.13□□□□□ -0.15
HttP42859 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.13□□□□□ -0.15
HttP42859 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.13□□□□□ -0.15
HttP42859 Gm24845-201ENSMUST00000158034 109 ntBASIC14.13□□□□□ -0.15
HttP42859 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HttP42859 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms