Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl12P40224 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Cxcl12P40224 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl12P40224 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl12P40224 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.96□□□□□ -0.17
Cxcl12P40224 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cxcl12P40224 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.96□□□□□ -0.17
Cxcl12P40224 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl12P40224 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Cxcl12P40224 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl12P40224 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl12P40224 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl12P40224 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.96□□□□□ -0.17
Cxcl12P40224 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl12P40224 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl12P40224 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.96□□□□□ -0.17
Cxcl12P40224 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cxcl12P40224 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.96□□□□□ -0.17
Cxcl12P40224 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.96□□□□□ -0.17
Cxcl12P40224 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Cxcl12P40224 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl12P40224 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.96□□□□□ -0.17
Cxcl12P40224 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cxcl12P40224 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl12P40224 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cxcl12P40224 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.96□□□□□ -0.17
Cxcl12P40224 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl12P40224 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl12P40224 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cxcl12P40224 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cxcl12P40224 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cxcl12P40224 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.96□□□□□ -0.18
Cxcl12P40224 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cxcl12P40224 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cxcl12P40224 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cxcl12P40224 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.95□□□□□ -0.18
Cxcl12P40224 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.95□□□□□ -0.18
Cxcl12P40224 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cxcl12P40224 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.95□□□□□ -0.18
Cxcl12P40224 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.95□□□□□ -0.18
Cxcl12P40224 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.95□□□□□ -0.18
Cxcl12P40224 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.95□□□□□ -0.18
Cxcl12P40224 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cxcl12P40224 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.95□□□□□ -0.18
Cxcl12P40224 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.95□□□□□ -0.18
Cxcl12P40224 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Cxcl12P40224 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cxcl12P40224 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cxcl12P40224 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.94□□□□□ -0.18
Cxcl12P40224 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
Cxcl12P40224 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.94□□□□□ -0.18
Cxcl12P40224 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.94□□□□□ -0.18
Cxcl12P40224 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Cxcl12P40224 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.94□□□□□ -0.18
Cxcl12P40224 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Cxcl12P40224 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.94□□□□□ -0.18
Cxcl12P40224 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cxcl12P40224 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.94□□□□□ -0.18
Cxcl12P40224 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cxcl12P40224 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cxcl12P40224 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cxcl12P40224 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cxcl12P40224 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms