Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm16215-201ENSMUST00000161990 637 ntBASIC12.62□□□□□ -0.39
Cd40lgP27548 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cd40lgP27548 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.62□□□□□ -0.39
Cd40lgP27548 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Cd40lgP27548 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.62□□□□□ -0.39
Cd40lgP27548 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cd40lgP27548 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cd40lgP27548 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.62□□□□□ -0.39
Cd40lgP27548 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.62□□□□□ -0.39
Cd40lgP27548 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cd40lgP27548 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.62□□□□□ -0.39
Cd40lgP27548 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd40lgP27548 Syt7-204ENSMUST00000223586 1344 ntBASIC12.62□□□□□ -0.39
Cd40lgP27548 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.61□□□□□ -0.39
Cd40lgP27548 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cd40lgP27548 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cd40lgP27548 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cd40lgP27548 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.61□□□□□ -0.39
Cd40lgP27548 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.61□□□□□ -0.39
Cd40lgP27548 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Cd40lgP27548 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.61□□□□□ -0.39
Cd40lgP27548 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.61□□□□□ -0.39
Cd40lgP27548 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cd40lgP27548 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cd40lgP27548 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.61□□□□□ -0.39
Cd40lgP27548 Gm43703-201ENSMUST00000200523 763 ntBASIC12.61□□□□□ -0.39
Cd40lgP27548 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cd40lgP27548 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cd40lgP27548 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cd40lgP27548 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd40lgP27548 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Syt7-205ENSMUST00000224135 1557 ntBASIC12.6□□□□□ -0.39
Cd40lgP27548 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.6□□□□□ -0.39
Cd40lgP27548 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.6□□□□□ -0.39
Cd40lgP27548 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cd40lgP27548 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.6□□□□□ -0.39
Cd40lgP27548 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd40lgP27548 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms