Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Gm13223-201ENSMUST00000118609 747 ntBASIC12.15□□□□□ -0.46
P20040 Gm14767-201ENSMUST00000121559 586 ntBASIC12.15□□□□□ -0.46
P20040 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.15□□□□□ -0.46
P20040 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.15□□□□□ -0.46
P20040 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.15□□□□□ -0.46
P20040 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.15□□□□□ -0.46
P20040 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.15□□□□□ -0.46
P20040 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.15□□□□□ -0.46
P20040 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.15□□□□□ -0.46
P20040 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P20040 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
P20040 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
P20040 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
P20040 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
P20040 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
P20040 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
P20040 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
P20040 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
P20040 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
P20040 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.14□□□□□ -0.47
P20040 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.14□□□□□ -0.47
P20040 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
P20040 Gm10275-202ENSMUST00000168697 495 ntBASIC12.14□□□□□ -0.47
P20040 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Gm27533-201ENSMUST00000183800 152 ntBASIC12.14□□□□□ -0.47
P20040 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Gm45453-201ENSMUST00000211758 853 ntBASIC12.14□□□□□ -0.47
P20040 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.14□□□□□ -0.47
P20040 Gm10275-201ENSMUST00000092620 635 ntBASIC12.14□□□□□ -0.47
P20040 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
P20040 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.14□□□□□ -0.47
P20040 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P20040 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
P20040 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.13□□□□□ -0.47
P20040 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
P20040 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.13□□□□□ -0.47
P20040 Gm27631-201ENSMUST00000184163 466 ntBASIC12.13□□□□□ -0.47
P20040 Gm38294-201ENSMUST00000192831 381 ntBASIC12.13□□□□□ -0.47
P20040 AA619741-201ENSMUST00000195095 646 ntBASIC12.13□□□□□ -0.47
P20040 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P20040 Gm20949-201ENSMUST00000206478 952 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms