Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgn1P18608 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hmgn1P18608 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hmgn1P18608 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.48□□□□□ -0.41
Hmgn1P18608 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.48□□□□□ -0.41
Hmgn1P18608 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 Gm5364-201ENSMUST00000216789 889 ntBASIC12.48□□□□□ -0.41
Hmgn1P18608 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.48□□□□□ -0.41
Hmgn1P18608 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.48□□□□□ -0.41
Hmgn1P18608 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Hmgn1P18608 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.48□□□□□ -0.41
Hmgn1P18608 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hmgn1P18608 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.48□□□□□ -0.41
Hmgn1P18608 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Hmgn1P18608 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Hmgn1P18608 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.47□□□□□ -0.41
Hmgn1P18608 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.47□□□□□ -0.41
Hmgn1P18608 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Gm10819-201ENSMUST00000099988 561 ntBASIC12.47□□□□□ -0.41
Hmgn1P18608 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.47□□□□□ -0.41
Hmgn1P18608 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.47□□□□□ -0.41
Hmgn1P18608 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Hmgn1P18608 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.47□□□□□ -0.41
Hmgn1P18608 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.47□□□□□ -0.41
Hmgn1P18608 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Hmgn1P18608 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hmgn1P18608 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn1P18608 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Hmgn1P18608 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn1P18608 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn1P18608 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Hmgn1P18608 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Hmgn1P18608 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn1P18608 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn1P18608 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn1P18608 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn1P18608 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn1P18608 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Hmgn1P18608 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn1P18608 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.46□□□□□ -0.41
Hmgn1P18608 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Hmgn1P18608 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hmgn1P18608 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn1P18608 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn1P18608 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn1P18608 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Hmgn1P18608 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.46□□□□□ -0.41
Hmgn1P18608 Rprl2-201ENSMUST00000157150 290 ntBASIC12.46□□□□□ -0.41
Hmgn1P18608 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.46□□□□□ -0.41
Hmgn1P18608 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.46□□□□□ -0.41
Hmgn1P18608 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.46□□□□□ -0.41
Hmgn1P18608 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn1P18608 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn1P18608 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn1P18608 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.46□□□□□ -0.42
Hmgn1P18608 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.46□□□□□ -0.42
Hmgn1P18608 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgn1P18608 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgn1P18608 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgn1P18608 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgn1P18608 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms