Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Cntn1P12960 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cntn1P12960 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cntn1P12960 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cntn1P12960 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cntn1P12960 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cntn1P12960 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.08□□□□□ -0.31
Cntn1P12960 Acot6-202ENSMUST00000222921 3622 ntBASIC13.08□□□□□ -0.31
Cntn1P12960 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.08□□□□□ -0.31
Cntn1P12960 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cntn1P12960 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Cntn1P12960 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.08□□□□□ -0.32
Cntn1P12960 Gm13689-201ENSMUST00000119360 685 ntBASIC13.08□□□□□ -0.32
Cntn1P12960 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.08□□□□□ -0.32
Cntn1P12960 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cntn1P12960 Gm8602-201ENSMUST00000184045 607 ntBASIC13.08□□□□□ -0.32
Cntn1P12960 Gm18187-201ENSMUST00000196476 984 ntBASIC13.08□□□□□ -0.32
Cntn1P12960 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cntn1P12960 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.08□□□□□ -0.32
Cntn1P12960 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.08□□□□□ -0.32
Cntn1P12960 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Matn2-206ENSMUST00000228570 2798 ntBASIC13.08□□□□□ -0.32
Cntn1P12960 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cntn1P12960 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cntn1P12960 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.08□□□□□ -0.32
Cntn1P12960 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cntn1P12960 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Gm15429-201ENSMUST00000151268 798 ntBASIC13.07□□□□□ -0.32
Cntn1P12960 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Gm9002-201ENSMUST00000178437 499 ntBASIC13.07□□□□□ -0.32
Cntn1P12960 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Cntn1P12960 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cntn1P12960 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.07□□□□□ -0.32
Cntn1P12960 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Cntn1P12960 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.07□□□□□ -0.32
Cntn1P12960 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cntn1P12960 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cntn1P12960 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cntn1P12960 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cntn1P12960 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Cntn1P12960 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cntn1P12960 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cntn1P12960 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.06□□□□□ -0.32
Cntn1P12960 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cntn1P12960 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cntn1P12960 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cntn1P12960 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
Cntn1P12960 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms