Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
Ccl1P10146 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Ccl1P10146 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.56□□□□□ -0.72
Ccl1P10146 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccl1P10146 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Ccl1P10146 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccl1P10146 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC10.56□□□□□ -0.72
Ccl1P10146 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC10.56□□□□□ -0.72
Ccl1P10146 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.56□□□□□ -0.72
Ccl1P10146 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.56□□□□□ -0.72
Ccl1P10146 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Ccl1P10146 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.56□□□□□ -0.72
Ccl1P10146 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ccl1P10146 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccl1P10146 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccl1P10146 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Ccl1P10146 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ccl1P10146 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccl1P10146 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Ccl1P10146 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.55□□□□□ -0.72
Ccl1P10146 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Ccl1P10146 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccl1P10146 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccl1P10146 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl1P10146 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl1P10146 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl1P10146 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl1P10146 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl1P10146 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl1P10146 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl1P10146 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl1P10146 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl1P10146 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl1P10146 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl1P10146 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Ccl1P10146 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccl1P10146 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Ccl1P10146 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Ccl1P10146 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms