Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2aP08775 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2aP08775 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2aP08775 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2aP08775 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2aP08775 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2aP08775 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2aP08775 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.27■□□□□ 0.04
Polr2aP08775 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2aP08775 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.27■□□□□ 0.03
Polr2aP08775 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.27■□□□□ 0.03
Polr2aP08775 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2aP08775 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2aP08775 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.27■□□□□ 0.03
Polr2aP08775 Gm24514-201ENSMUST00000174961 285 ntBASIC15.27■□□□□ 0.03
Polr2aP08775 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2aP08775 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC15.27■□□□□ 0.03
Polr2aP08775 Gm8099-201ENSMUST00000200510 742 ntBASIC15.27■□□□□ 0.03
Polr2aP08775 Gm10109-202ENSMUST00000206890 1211 ntBASIC15.27■□□□□ 0.03
Polr2aP08775 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2aP08775 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2aP08775 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2aP08775 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2aP08775 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2aP08775 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2aP08775 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Polr2aP08775 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Polr2aP08775 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2aP08775 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2aP08775 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2aP08775 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2aP08775 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Polr2aP08775 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Polr2aP08775 Daam2-202ENSMUST00000224595 1926 ntBASIC15.26■□□□□ 0.03
Polr2aP08775 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Polr2aP08775 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Polr2aP08775 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Polr2aP08775 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2aP08775 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC15.25■□□□□ 0.03
Polr2aP08775 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Polr2aP08775 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.25■□□□□ 0.03
Polr2aP08775 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.25■□□□□ 0.03
Polr2aP08775 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC15.25■□□□□ 0.03
Polr2aP08775 Gm18556-201ENSMUST00000219748 1031 ntBASIC15.25■□□□□ 0.03
Polr2aP08775 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC15.25■□□□□ 0.03
Polr2aP08775 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.25■□□□□ 0.03
Polr2aP08775 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Polr2aP08775 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Polr2aP08775 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.25■□□□□ 0.03
Polr2aP08775 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC15.25■□□□□ 0.03
Polr2aP08775 Gm15547-201ENSMUST00000122152 333 ntBASIC15.25■□□□□ 0.03
Polr2aP08775 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.25■□□□□ 0.03
Polr2aP08775 Gm43378-201ENSMUST00000199336 582 ntBASIC15.25■□□□□ 0.03
Polr2aP08775 Gm44100-201ENSMUST00000204329 436 ntBASIC15.25■□□□□ 0.03
Polr2aP08775 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC15.25■□□□□ 0.03
Polr2aP08775 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.25■□□□□ 0.03
Polr2aP08775 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2aP08775 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms