Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TnfP06804 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TnfP06804 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TnfP06804 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.44□□□□□ -0.1
TnfP06804 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TnfP06804 Mir1982-201ENSMUST00000157368 74 ntBASIC14.44□□□□□ -0.1
TnfP06804 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TnfP06804 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.44□□□□□ -0.1
TnfP06804 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.44□□□□□ -0.1
TnfP06804 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.44□□□□□ -0.1
TnfP06804 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.44□□□□□ -0.1
TnfP06804 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TnfP06804 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TnfP06804 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TnfP06804 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.44□□□□□ -0.1
TnfP06804 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TnfP06804 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.43□□□□□ -0.1
TnfP06804 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
TnfP06804 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TnfP06804 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Gm5687-201ENSMUST00000118252 640 ntBASIC14.43□□□□□ -0.1
TnfP06804 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.43□□□□□ -0.1
TnfP06804 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TnfP06804 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Gm29649-201ENSMUST00000185649 419 ntBASIC14.43□□□□□ -0.1
TnfP06804 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.43□□□□□ -0.1
TnfP06804 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.43□□□□□ -0.1
TnfP06804 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.43□□□□□ -0.1
TnfP06804 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.43□□□□□ -0.1
TnfP06804 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TnfP06804 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.43□□□□□ -0.1
TnfP06804 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TnfP06804 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
TnfP06804 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
TnfP06804 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TnfP06804 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.42□□□□□ -0.1
TnfP06804 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Gm24196-201ENSMUST00000179161 110 ntBASIC14.42□□□□□ -0.1
TnfP06804 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TnfP06804 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TnfP06804 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.42□□□□□ -0.1
TnfP06804 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TnfP06804 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms