Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cops4O88544 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cops4O88544 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cops4O88544 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.59□□□□□ -0.39
Cops4O88544 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.59□□□□□ -0.39
Cops4O88544 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.59□□□□□ -0.39
Cops4O88544 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Gm6973-201ENSMUST00000117080 721 ntBASIC12.59□□□□□ -0.39
Cops4O88544 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cops4O88544 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.59□□□□□ -0.39
Cops4O88544 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.59□□□□□ -0.39
Cops4O88544 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.59□□□□□ -0.39
Cops4O88544 Gm44608-201ENSMUST00000206827 855 ntBASIC12.59□□□□□ -0.39
Cops4O88544 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.59□□□□□ -0.39
Cops4O88544 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.59□□□□□ -0.39
Cops4O88544 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cops4O88544 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cops4O88544 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.58□□□□□ -0.39
Cops4O88544 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cops4O88544 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cops4O88544 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cops4O88544 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cops4O88544 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Cops4O88544 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.58□□□□□ -0.4
Cops4O88544 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cops4O88544 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.58□□□□□ -0.4
Cops4O88544 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.58□□□□□ -0.4
Cops4O88544 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.58□□□□□ -0.4
Cops4O88544 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.58□□□□□ -0.4
Cops4O88544 Gm11025-201ENSMUST00000140773 466 ntBASIC12.58□□□□□ -0.4
Cops4O88544 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.58□□□□□ -0.4
Cops4O88544 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cops4O88544 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cops4O88544 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.58□□□□□ -0.4
Cops4O88544 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cops4O88544 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.58□□□□□ -0.4
Cops4O88544 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cops4O88544 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cops4O88544 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Cops4O88544 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cops4O88544 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cops4O88544 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.57□□□□□ -0.4
Cops4O88544 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Cops4O88544 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cops4O88544 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cops4O88544 Gm15467-201ENSMUST00000120582 445 ntBASIC12.57□□□□□ -0.4
Cops4O88544 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cops4O88544 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.57□□□□□ -0.4
Cops4O88544 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms