Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdlim1O70400 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pdlim1O70400 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdlim1O70400 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pdlim1O70400 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.48□□□□□ -0.25
Pdlim1O70400 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Gm15376-201ENSMUST00000122258 783 ntBASIC13.48□□□□□ -0.25
Pdlim1O70400 Mir7654-201ENSMUST00000185082 70 ntBASIC13.48□□□□□ -0.25
Pdlim1O70400 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.48□□□□□ -0.25
Pdlim1O70400 Gm38144-201ENSMUST00000192790 465 ntBASIC13.48□□□□□ -0.25
Pdlim1O70400 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Gm18307-201ENSMUST00000206864 949 ntBASIC13.48□□□□□ -0.25
Pdlim1O70400 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.48□□□□□ -0.25
Pdlim1O70400 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdlim1O70400 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.48□□□□□ -0.25
Pdlim1O70400 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pdlim1O70400 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdlim1O70400 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pdlim1O70400 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdlim1O70400 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pdlim1O70400 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdlim1O70400 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdlim1O70400 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.48□□□□□ -0.25
Pdlim1O70400 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pdlim1O70400 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Pdlim1O70400 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Pdlim1O70400 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pdlim1O70400 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.47□□□□□ -0.25
Pdlim1O70400 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pdlim1O70400 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.47□□□□□ -0.25
Pdlim1O70400 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pdlim1O70400 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.47□□□□□ -0.25
Pdlim1O70400 Gm18018-201ENSMUST00000198273 408 ntBASIC13.47□□□□□ -0.25
Pdlim1O70400 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.47□□□□□ -0.25
Pdlim1O70400 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pdlim1O70400 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.47□□□□□ -0.25
Pdlim1O70400 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
Pdlim1O70400 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pdlim1O70400 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pdlim1O70400 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pdlim1O70400 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.46□□□□□ -0.25
Pdlim1O70400 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Pdlim1O70400 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.46□□□□□ -0.25
Pdlim1O70400 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.46□□□□□ -0.25
Pdlim1O70400 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pdlim1O70400 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pdlim1O70400 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Pdlim1O70400 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms