Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.68□□□□□ -0.06
Nr1i3O35627 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.68□□□□□ -0.06
Nr1i3O35627 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nr1i3O35627 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nr1i3O35627 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.68□□□□□ -0.06
Nr1i3O35627 Gm15770-201ENSMUST00000117498 584 ntBASIC14.68□□□□□ -0.06
Nr1i3O35627 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.68□□□□□ -0.06
Nr1i3O35627 Gm27702-201ENSMUST00000184512 56 ntBASIC14.68□□□□□ -0.06
Nr1i3O35627 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.68□□□□□ -0.06
Nr1i3O35627 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.68□□□□□ -0.06
Nr1i3O35627 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.68□□□□□ -0.06
Nr1i3O35627 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.68□□□□□ -0.06
Nr1i3O35627 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nr1i3O35627 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Nr1i3O35627 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nr1i3O35627 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.67□□□□□ -0.06
Nr1i3O35627 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nr1i3O35627 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.67□□□□□ -0.06
Nr1i3O35627 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.67□□□□□ -0.06
Nr1i3O35627 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.67□□□□□ -0.06
Nr1i3O35627 Gm26308-201ENSMUST00000157768 69 ntBASIC14.67□□□□□ -0.06
Nr1i3O35627 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.67□□□□□ -0.06
Nr1i3O35627 Gm27772-201ENSMUST00000184900 187 ntBASIC14.67□□□□□ -0.06
Nr1i3O35627 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.67□□□□□ -0.06
Nr1i3O35627 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.67□□□□□ -0.06
Nr1i3O35627 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nr1i3O35627 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Nr1i3O35627 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.67□□□□□ -0.06
Nr1i3O35627 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nr1i3O35627 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nr1i3O35627 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.66□□□□□ -0.06
Nr1i3O35627 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Nr1i3O35627 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.66□□□□□ -0.06
Nr1i3O35627 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nr1i3O35627 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nr1i3O35627 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Syt7-205ENSMUST00000224135 1557 ntBASIC14.66□□□□□ -0.06
Nr1i3O35627 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Gm18905-201ENSMUST00000205454 928 ntBASIC14.66□□□□□ -0.06
Nr1i3O35627 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.66□□□□□ -0.06
Nr1i3O35627 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nr1i3O35627 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nr1i3O35627 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.66□□□□□ -0.06
Nr1i3O35627 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nr1i3O35627 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nr1i3O35627 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms