Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.19□□□□□ -0.14
Ebf3O08791 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.18□□□□□ -0.14
Ebf3O08791 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.18□□□□□ -0.14
Ebf3O08791 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Ebf3O08791 Gm12928-201ENSMUST00000117115 573 ntBASIC14.18□□□□□ -0.14
Ebf3O08791 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.18□□□□□ -0.14
Ebf3O08791 Mir6420-201ENSMUST00000185032 102 ntBASIC14.18□□□□□ -0.14
Ebf3O08791 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.18□□□□□ -0.14
Ebf3O08791 Gm45841-201ENSMUST00000207700 164 ntBASIC14.18□□□□□ -0.14
Ebf3O08791 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ebf3O08791 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ebf3O08791 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.18□□□□□ -0.14
Ebf3O08791 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.18□□□□□ -0.14
Ebf3O08791 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf3O08791 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.17□□□□□ -0.14
Ebf3O08791 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.17□□□□□ -0.14
Ebf3O08791 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.17□□□□□ -0.14
Ebf3O08791 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ebf3O08791 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.17□□□□□ -0.14
Ebf3O08791 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Ebf3O08791 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf3O08791 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.16□□□□□ -0.14
Ebf3O08791 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.16□□□□□ -0.14
Ebf3O08791 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.16□□□□□ -0.14
Ebf3O08791 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.16□□□□□ -0.14
Ebf3O08791 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.16□□□□□ -0.14
Ebf3O08791 Gm8652-201ENSMUST00000181363 964 ntBASIC14.16□□□□□ -0.14
Ebf3O08791 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.16□□□□□ -0.14
Ebf3O08791 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
Ebf3O08791 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 Gm7287-201ENSMUST00000205267 602 ntBASIC14.16□□□□□ -0.14
Ebf3O08791 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.16□□□□□ -0.14
Ebf3O08791 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.16□□□□□ -0.14
Ebf3O08791 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ebf3O08791 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf3O08791 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms