Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh9F8VPK8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14□□□□□ -0.17
Pcdh9F8VPK8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14□□□□□ -0.17
Pcdh9F8VPK8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14□□□□□ -0.17
Pcdh9F8VPK8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Pcdh9F8VPK8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Gm25144-201ENSMUST00000179561 110 ntBASIC14□□□□□ -0.17
Pcdh9F8VPK8 Gm25352-201ENSMUST00000179815 110 ntBASIC14□□□□□ -0.17
Pcdh9F8VPK8 Gm4804-201ENSMUST00000182234 999 ntBASIC14□□□□□ -0.17
Pcdh9F8VPK8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Gm46209-201ENSMUST00000217912 553 ntBASIC14□□□□□ -0.17
Pcdh9F8VPK8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh9F8VPK8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Gm15393-201ENSMUST00000120499 219 ntBASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh9F8VPK8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.98□□□□□ -0.17
Pcdh9F8VPK8 Gm10766-202ENSMUST00000194123 606 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms