Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Gm26083-201ENSMUST00000157904 193 ntBASIC11.51□□□□□ -0.57
Col6a4A2AX52 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Gm38266-201ENSMUST00000194931 421 ntBASIC11.51□□□□□ -0.57
Col6a4A2AX52 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.51□□□□□ -0.57
Col6a4A2AX52 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a4A2AX52 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.5□□□□□ -0.57
Col6a4A2AX52 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.5□□□□□ -0.57
Col6a4A2AX52 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Gm15371-201ENSMUST00000117057 784 ntBASIC11.5□□□□□ -0.57
Col6a4A2AX52 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.5□□□□□ -0.57
Col6a4A2AX52 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.5□□□□□ -0.57
Col6a4A2AX52 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.5□□□□□ -0.57
Col6a4A2AX52 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.5□□□□□ -0.57
Col6a4A2AX52 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.5□□□□□ -0.57
Col6a4A2AX52 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.5□□□□□ -0.57
Col6a4A2AX52 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Col6a4A2AX52 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Gm13369-201ENSMUST00000119442 987 ntBASIC11.49□□□□□ -0.57
Col6a4A2AX52 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.49□□□□□ -0.57
Col6a4A2AX52 Gm37008-201ENSMUST00000195712 319 ntBASIC11.49□□□□□ -0.57
Col6a4A2AX52 Gm43138-201ENSMUST00000199123 708 ntBASIC11.49□□□□□ -0.57
Col6a4A2AX52 Gm42550-201ENSMUST00000201553 960 ntBASIC11.49□□□□□ -0.57
Col6a4A2AX52 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.49□□□□□ -0.57
Col6a4A2AX52 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.49□□□□□ -0.57
Col6a4A2AX52 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.49□□□□□ -0.57
Col6a4A2AX52 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.49□□□□□ -0.57
Col6a4A2AX52 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a4A2AX52 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a4A2AX52 Gm25261-201ENSMUST00000157416 134 ntBASIC11.48□□□□□ -0.57
Col6a4A2AX52 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms