Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Gm7774-201ENSMUST00000200064 533 ntBASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Gm9229-201ENSMUST00000222777 126 ntBASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Chchd1-203ENSMUST00000224633 557 ntBASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ccdc112A0AUP1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Mir449b-201ENSMUST00000104833 80 ntBASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Gm14822-201ENSMUST00000122247 291 ntBASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Gm27622-201ENSMUST00000183779 60 ntBASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Gm27533-201ENSMUST00000183800 152 ntBASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ccdc112A0AUP1 Rubie-203ENSMUST00000227803 2430 ntBASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Gm13385-201ENSMUST00000121089 220 ntBASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Gm5312-201ENSMUST00000203728 547 ntBASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc112A0AUP1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc112A0AUP1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc112A0AUP1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 Gm8410-201ENSMUST00000117225 605 ntBASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms