Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
PdfS4R2K0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.49□□□□□ -0.73
PdfS4R2K0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
PdfS4R2K0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.49□□□□□ -0.73
PdfS4R2K0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.49□□□□□ -0.73
PdfS4R2K0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.49□□□□□ -0.73
PdfS4R2K0 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.49□□□□□ -0.73
PdfS4R2K0 Gm9182-201ENSMUST00000217829 639 ntBASIC10.49□□□□□ -0.73
PdfS4R2K0 Gm18246-201ENSMUST00000221023 728 ntBASIC10.49□□□□□ -0.73
PdfS4R2K0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
PdfS4R2K0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
PdfS4R2K0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
PdfS4R2K0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
PdfS4R2K0 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.48□□□□□ -0.73
PdfS4R2K0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
PdfS4R2K0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
PdfS4R2K0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
PdfS4R2K0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
PdfS4R2K0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC10.48□□□□□ -0.73
PdfS4R2K0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
PdfS4R2K0 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.48□□□□□ -0.73
PdfS4R2K0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC10.48□□□□□ -0.73
PdfS4R2K0 Gm2451-201ENSMUST00000199447 999 ntBASIC10.48□□□□□ -0.73
PdfS4R2K0 Gm10290-201ENSMUST00000200451 999 ntBASIC10.48□□□□□ -0.73
PdfS4R2K0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.48□□□□□ -0.73
PdfS4R2K0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
PdfS4R2K0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
PdfS4R2K0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
PdfS4R2K0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC10.48□□□□□ -0.73
PdfS4R2K0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
PdfS4R2K0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC10.48□□□□□ -0.73
PdfS4R2K0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
PdfS4R2K0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms